By killing the ‘running’ process and re-triggering it I have now gotten it to work! That said, I had previously tried this and it didn’t work.
I will be running several more of this type of workflow in the future so will report back if I see the same issue again.
All our data analysis is done through Cylc suites.
I’ve noticed a persistent problem with some tasks in that they report a
running status for hours, sometimes days before completing.
However, when you look at the job.out files after the job has succeeded, it says that the job only took 40 minutes or so.
Is this behaviour known at all? I’m a bit stumped and am not sure how to investigate further…
I’ve also reported this to the JASMIN helpdesk.
Thanks for any tips.